| Rk | Renner | Ploeg | Stage name | Ranking name | Points | Koers |
| 1 | Michael Rich | LTC | Final Ranking | Final ranking | 160 | Bayern Rundfahrt |
| 2 | Alexandre Vinokourov | BCT | Final Ranking | Final ranking | 120 | Bayern Rundfahrt |
| 3 | Linus Gerdemann | (AFR) | Final Ranking | Final ranking | 96 | Bayern Rundfahrt |
| 4 | Tomasz Brozyna | BCT | Final Ranking | Final ranking | 88 | Bayern Rundfahrt |
| 5 | Bjorn Glasner | TL | Final Ranking | Final ranking | 80 | Bayern Rundfahrt |
| 6 | Corey Sweet | ERW | Final Ranking | Final ranking | 72 | Bayern Rundfahrt |
| 7 | Mikel Astarloza Chaurreau | (EUS) | Final Ranking | Final ranking | 64 | Bayern Rundfahrt |
| 8 | Gabriele Bosisio | HBT | Final Ranking | Final ranking | 56 | Bayern Rundfahrt |
| 9 | Stephane Goubert | OWC | Final Ranking | Final ranking | 48 | Bayern Rundfahrt |
| 10 | Ruslan Pidgornyy | TL | Final Ranking | Final ranking | 40 | Bayern Rundfahrt |
| 11 | Holger Sievers | TL | Final Ranking | Final ranking | 35 | Bayern Rundfahrt |
| 12 | Frederik Veuchelen | TL | Final Ranking | Final ranking | 30 | Bayern Rundfahrt |
| 13 | Nicki Sorensen | BOL | Final Ranking | Final ranking | 27 | Bayern Rundfahrt |
| 14 | Enrico Poitschke | TL | Final Ranking | Final ranking | 24 | Bayern Rundfahrt |
| 15 | Zbigniew Piatek | TL | Final Ranking | Final ranking | 21 | Bayern Rundfahrt |
| 16 | Cezary Zamana | TL | Final Ranking | Final ranking | 19 | Bayern Rundfahrt |
| 17 | Bjorn Papstein | TL | Final Ranking | Final ranking | 17 | Bayern Rundfahrt |
| 18 | Thomas Liese | TL | Final Ranking | Final ranking | 15 | Bayern Rundfahrt |
| 19 | Petr Bencik | TL | Final Ranking | Final ranking | 13 | Bayern Rundfahrt |
| 20 | Sergio Barbero | TL | Final Ranking | Final ranking | 11 | Bayern Rundfahrt |
| 21 | Eddy Serri | TL | Final Ranking | Final ranking | 10 | Bayern Rundfahrt |
| 22 | Johan Coenen | SYS | Final Ranking | Final ranking | 9 | Bayern Rundfahrt |
| 23 | Elnathan Heizmann | TL | Final Ranking | Final ranking | 8 | Bayern Rundfahrt |
| 24 | David McPartland | (PAT) | Final Ranking | Final ranking | 7 | Bayern Rundfahrt |
| 25 | Kurt-Asle Arvesen | JOJ | Final Ranking | Final ranking | 6 | Bayern Rundfahrt |
| 26 | David Kopp | SUP | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 27 | Alessio Galletti | (HBT) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 28 | Rene Haselbacher | (AFR) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 29 | Pavel Zerzan | TL | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 30 | Sean Sullivan | (CBD) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 31 | Alexandre Usov | OCO | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 32 | Christian Muller | HBT | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 33 | Andreas Kloden | AFR | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 34 | Jens Voigt | OWC | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 35 | Ronny Scholz | SUP | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 36 | Nicolas Portal | TTB | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 37 | Yuriy Krivtsov | CBD | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 38 | Giuseppe Guerini | CSI | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 39 | Sebastian Siedler | CSI | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 40 | Uwe Peschel | TL | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 41 | Bernhard Kohl | (TCF) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 42 | Bjorn Schroder | HBT | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 43 | Timo Scholz | TL | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 44 | Jens Heppner | TL | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 45 | Jaroslaw Zarebski | DUK | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 46 | Milan Kadlec | BCT | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 47 | Kurt van de Wouwer | ARM | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 48 | Francesco Failli | (DCO) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 49 | Luke Roberts | (TCF) | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 50 | Steffen Wesemann | AFR | Final Ranking | Final ranking | 5 | Bayern Rundfahrt |
| 1 | Jan Svorada | ARM | stage 01 | Stage winner | 25 | Bayern Rundfahrt |
| 2 | Enrico Degano | (TCF) | stage 01 | Stage winner | 15 | Bayern Rundfahrt |
| 3 | Sebastian Siedler | CSI | stage 01 | Stage winner | 10 | Bayern Rundfahrt |
| 4 | Luke Roberts | (TCF) | stage 01 | Stage winner | 5 | Bayern Rundfahrt |
| 1 | Jean-Patrick Nazon | DTK | stage 02 | Stage winner | 25 | Bayern Rundfahrt |
| 2 | Sebastian Siedler | CSI | stage 02 | Stage winner | 15 | Bayern Rundfahrt |
| 3 | Murilo Antonio Fischer | CBD | stage 02 | Stage winner | 10 | Bayern Rundfahrt |
| 4 | Maarten Wijnants | TTB | stage 02 | Stage winner | 5 | Bayern Rundfahrt |
| 1 | David Kopp | SUP | stage 03 | Stage winner | 25 | Bayern Rundfahrt |
| 2 | Bjorn Glasner | TL | stage 03 | Stage winner | 15 | Bayern Rundfahrt |
| 3 | Cezary Zamana | TL | stage 03 | Stage winner | 10 | Bayern Rundfahrt |
| 4 | Elnathan Heizmann | TL | stage 03 | Stage winner | 5 | Bayern Rundfahrt |
| 1 | Jens Voigt | OWC | stage 04 | Stage winner | 25 | Bayern Rundfahrt |
| 2 | Michael Rich | LTC | stage 04 | Stage winner | 15 | Bayern Rundfahrt |
| 3 | Alexandre Vinokourov | BCT | stage 04 | Stage winner | 10 | Bayern Rundfahrt |
| 4 | Andreas Kloden | AFR | stage 04 | Stage winner | 5 | Bayern Rundfahrt |
| 1 | Andreas Kloden | AFR | stage 05 | Stage winner | 25 | Bayern Rundfahrt |
| 2 | Nicolas Portal | TTB | stage 05 | Stage winner | 15 | Bayern Rundfahrt |
| 3 | Kurt-Asle Arvesen | JOJ | stage 05 | Stage winner | 10 | Bayern Rundfahrt |
| 4 | Sebastian Siedler | CSI | stage 05 | Stage winner | 5 | Bayern Rundfahrt |
| 1 | Jan Svorada | ARM | stage 01 | Stage leader | 8 | Bayern Rundfahrt |
| 1 | Sebastian Siedler | CSI | stage 02 | Stage leader | 8 | Bayern Rundfahrt |
| 1 | David Kopp | SUP | stage 03 | Stage leader | 8 | Bayern Rundfahrt |
| 1 | Michael Rich | LTC | stage 04 | Stage leader | 8 | Bayern Rundfahrt |